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1.
Front Microbiol ; 14: 1201230, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37408638

RESUMO

Introduction: Microbial communities are important components of glacier and snowpack ecosystems that influence biogeochemical cycles and snow/ice melt. Recent environmental DNA surveys have revealed that chytrids dominate the fungal communities in polar and alpine snowpacks. These could be parasitic chytrids that infect snow algae as observed microscopically. However, the diversity and phylogenetic position of parasitic chytrids has not been identified due to difficulties in establishing their culture and subsequent DNA sequencing. In this study, we aimed to identify the phylogenetic positions of chytrids infecting the snow algae, Chloromonas spp., bloomed on snowpacks in Japan. Methods: By linking a microscopically picked single fungal sporangium on a snow algal cell to a subsequent sequence of ribosomal marker genes, we identified three novel lineages with distinct morphologies. Results: All the three lineages belonged to Mesochytriales, located within "Snow Clade 1", a novel clade consisting of uncultured chytrids from snow-covered environments worldwide. Additionally, putative resting spores of chytrids attached to snow algal cells were observed. Discussion: This suggests that chytrids may survive as resting stage in soil after snowmelt. Our study highlights the potential importance of parasitic chytrids that infect snow algal communities.

2.
Sci Rep ; 13(1): 3973, 2023 03 09.
Artigo em Inglês | MEDLINE | ID: mdl-36894609

RESUMO

Glacier algae, which are photosynthetic microbes growing on ice, considerably reduce the surface albedo of glaciers and accelerate their melting rate. Although the growth of glacier algae can be suppressed by parasitic chytrids, the impact of chytrids on algal populations is still largely unknown. In this study, we described the morphology of the chytrid infecting the glacier alga Ancylonema nordenskioeldii and quantified the prevalence of infection in different habitats on a mountain glacier in Alaska, USA. Microscopic observations revealed three different morphological types of chytrids with distinct rhizoid shapes. Variations in the size of the sporangia were probably because of their different growth stages, indicating that they actively propagated on the glacier. The prevalence of infection did not vary among sites with different elevations but was substantially higher in cryoconite holes (20%) than on ice surfaces (4%) at all sites. This indicates that cryoconite holes are hot spots for chytrid infections of glacier algae, and the dynamics of cryoconite holes might affect the host-parasite interactions between chytrids and the glacier algae, which may in turn alter surface albedo and ice melting.


Assuntos
Ecossistema , Camada de Gelo , Alaska/epidemiologia , Prevalência
3.
Commun Biol ; 6(1): 206, 2023 02 21.
Artigo em Inglês | MEDLINE | ID: mdl-36810576

RESUMO

Phytoplankton forms the base of aquatic food webs and element cycling in diverse aquatic systems. The fate of phytoplankton-derived organic matter, however, often remains unresolved as it is controlled by complex, interlinked remineralization and sedimentation processes. We here investigate a rarely considered control mechanism on sinking organic matter fluxes: fungal parasites infecting phytoplankton. We demonstrate that bacterial colonization is promoted 3.5-fold on fungal-infected phytoplankton cells in comparison to non-infected cells in a cultured model pathosystem (diatom Synedra, fungal microparasite Zygophlyctis, and co-growing bacteria), and even ≥17-fold in field-sampled populations (Planktothrix, Synedra, and Fragilaria). Additional data obtained using the Synedra-Zygophlyctis model system reveals that fungal infections reduce the formation of aggregates. Moreover, carbon respiration is 2-fold higher and settling velocities are 11-48% lower for similar-sized fungal-infected vs. non-infected aggregates. Our data imply that parasites can effectively control the fate of phytoplankton-derived organic matter on a single-cell to single-aggregate scale, potentially enhancing remineralization and reducing sedimentation in freshwater and coastal systems.


Assuntos
Diatomáceas , Fitoplâncton , Cadeia Alimentar , Bactérias , Água Doce/microbiologia
4.
Microb Ecol ; 85(1): 9-23, 2023 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-34854932

RESUMO

Fungal microparasites (here chytrids) are widely distributed and yet, they are often overlooked in aquatic environments. To facilitate the detection of microparasites, we revisited the applicability of two fungal cell wall markers, Calcofluor White (CFW) and wheat germ agglutinin (WGA), for the direct visualization of chytrid infections on phytoplankton in laboratory-maintained isolates and field-sampled communities. Using a comprehensive set of chytrid-phytoplankton model pathosystems, we verified the staining pattern on diverse morphological structures of chytrids via fluorescence microscopy. Empty sporangia were stained most effectively, followed by encysted zoospores and im-/mature sporangia, while the staining success was more variable for rhizoids, stalks, and resting spores. In a few instances, the staining was unsuccessful (mostly with WGA), presumably due to insufficient cell fixation, gelatinous cell coatings, and multilayered cell walls. CFW and WGA staining could be done in Utermöhl chambers or on polycarbonate filters, but CFW staining on filters seemed less advisable due to high background fluorescence. To visualize chytrids, 1 µg dye mL-1 was sufficient (but 5 µg mL-1 are recommended). Using a dual CFW-WGA staining protocol, we detected multiple, mostly undescribed chytrids in two natural systems (freshwater and coastal), while falsely positive or negative stained cells were well detectable. As a proof-of-concept, we moreover conducted imaging flow cytometry, as a potential high-throughput technology for quantifying chytrid infections. Our guidelines and recommendations are expected to facilitate the detection of chytrid epidemics and to unveil their ecological and economical imprint in natural and engineered aquatic systems.


Assuntos
Quitridiomicetos , Fitoplâncton , Corantes Fluorescentes , Lagos/microbiologia , Fungos
5.
Harmful Algae ; 120: 102352, 2022 12.
Artigo em Inglês | MEDLINE | ID: mdl-36470607

RESUMO

A new chytrid genus and species was isolated and cultured from samples obtained in the Baltic Sea during a dinoflagellate bloom event. This species is characterized by having a spherical sporangium without papillae and zoospores of 2-3 µm in diameter that are released through 3 discharge pores. Molecular phylogeny based on ribosomal operon showed its sister position to the Dinomyces cluster in Rhizophydiales. Zoospores lack fenestrated cisternae but contain a paracrystalline inclusion, found in a Rhizophydiales representative for the first time. Additionally, the kinetid features are uncommon for Rhizophydiales and only observed in Dinomyces representatives so far. These morphological features and its phylogenetic relationships justify the description of the new genus and speciesParadinomyces triforaminorum gen. nov. sp. nov. belonging to the family Dinomycetaceae. The chytrid was detected during a high-biomass bloom of the dinoflagellate Kryptoperidinium foliaceum. Laboratory experiments suggest this species is highly specific and demonstrate the impact it can have on HAB development. The chytrid co-occurred with three other parasites belonging to Chytridiomycota (Fungi) and Perkinsea (Alveolata), highlighting that parasitic interactions are common during HABs in brackish and marine systems, and these multiple parasites compete for similar hosts.


Assuntos
Alveolados , Quitridiomicetos , Dinoflagelados , Filogenia , Dinoflagelados/microbiologia
7.
ISME J ; 16(9): 2242-2254, 2022 09.
Artigo em Inglês | MEDLINE | ID: mdl-35764676

RESUMO

Zoosporic fungi of the phylum Chytridiomycota (chytrids) regularly dominate pelagic fungal communities in freshwater and marine environments. Their lifestyles range from obligate parasites to saprophytes. Yet, linking the scarce available sequence data to specific ecological traits or their host ranges constitutes currently a major challenge. We combined 28 S rRNA gene amplicon sequencing with targeted isolation and sequencing approaches, along with cross-infection assays and analysis of chytrid infection prevalence to obtain new insights into chytrid diversity, ecology, and seasonal dynamics in a temperate lake. Parasitic phytoplankton-chytrid and saprotrophic pollen-chytrid interactions made up the majority of zoosporic fungal reads. We explicitly demonstrate the recurrent dominance of parasitic chytrids during frequent diatom blooms and saprotrophic chytrids during pollen rains. Distinct temporal dynamics of diatom-specific parasitic clades suggest mechanisms of coexistence based on niche differentiation and competitive strategies. The molecular and ecological information on chytrids generated in this study will aid further exploration of their spatial and temporal distribution patterns worldwide. To fully exploit the power of environmental sequencing for studies on chytrid ecology and evolution, we emphasize the need to intensify current isolation efforts of chytrids and integrate taxonomic and autecological data into long-term studies and experiments.


Assuntos
Quitridiomicetos , Diatomáceas , Parasitos , Animais , Quitridiomicetos/genética , Diatomáceas/genética , Diatomáceas/microbiologia , Fungos/genética , Lagos/microbiologia , Fitoplâncton/microbiologia
8.
Mycologia ; 114(3): 544-555, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35605094

RESUMO

Aphelids (phylum Aphelida = Aphelidiomycota) are intracellular parasitoids of algae and represent one of the early-diverging or sister lineages of the kingdom Fungi. Although aphelids are a small group comprising four genera and 17 species, molecular phylogenetic analyses revealed that numerous environmental DNA sequences represent undescribed lineages, indicating their hidden diversity. Here, we investigated a novel aphelid strain, KS114, that parasitizes selenastracean green algae. KS114 exhibited a life cycle typical of aphelids and produced posteriorly uniflagellate zoospores that resembled those of Aphelidium chlorococcorum f. majus in possessing a single apical filopodium but could be distinguished by ultrastructure features. In KS114, the kinetosome and nonflagellated centriole were aligned in parallel, a unique characteristic among the known aphelids. Kinetid-associated structures, such as fibrillar root and microtubules, were not found in the zoospores of KS114. In the molecular phylogeny of nuc 18S rDNA sequences, KS114 clustered with two environmental sequences and was distinct from all other sequenced species. Based on these results, we describe this aphelid as a new species, Aphelidium parallelum.http://www.zoobank.org/urn:lsid:zoobank.org:act:3CB658DB-1F12-41EF-A57D-2CBFCDE6A49A.


Assuntos
Clorófitas , Eucariotos , Clorófitas/genética , DNA Ribossômico/genética , Eucariotos/genética , Eucariotos/ultraestrutura , Fungos , Filogenia
9.
Nat Commun ; 13(1): 1140, 2022 03 03.
Artigo em Inglês | MEDLINE | ID: mdl-35241667

RESUMO

Untangling causal links and feedbacks among biodiversity, ecosystem functioning, and environmental factors is challenging due to their complex and context-dependent interactions (e.g., a nutrient-dependent relationship between diversity and biomass). Consequently, studies that only consider separable, unidirectional effects can produce divergent conclusions and equivocal ecological implications. To address this complexity, we use empirical dynamic modeling to assemble causal networks for 19 natural aquatic ecosystems (N24◦~N58◦) and quantified strengths of feedbacks among phytoplankton diversity, phytoplankton biomass, and environmental factors. Through a cross-system comparison, we identify macroecological patterns; in more diverse, oligotrophic ecosystems, biodiversity effects are more important than environmental effects (nutrients and temperature) as drivers of biomass. Furthermore, feedback strengths vary with productivity. In warm, productive systems, strong nitrate-mediated feedbacks usually prevail, whereas there are strong, phosphate-mediated feedbacks in cold, less productive systems. Our findings, based on recovered feedbacks, highlight the importance of a network view in future ecosystem management.


Assuntos
Ecossistema , Fitoplâncton , Biodiversidade , Biomassa , Temperatura
10.
Sci Rep ; 11(1): 5769, 2021 03 11.
Artigo em Inglês | MEDLINE | ID: mdl-33707541

RESUMO

Contamination of freshwater fishes with 137Cs remains as a serious problem in Japan, nearly 10 years after the Fukushima nuclear power plant accident, but there is limited information on the distribution of 137Cs contamination in fish bodies. The 137Cs distribution can be used for the estimation of internal radiation exposure through the consumption of fish and for the dose estimation of fish themselves. In this study, the 137Cs distribution in the bodies of 8 freshwater fish species was investigated as percentages of total body burden for fish inhabiting Lake Inba. Fish samples were caught in stake nets placed close to the shore approximately once a month. After the measurement of body length and fresh weight, the radioactivities of 137Cs in muscle, internal organs, spawn, milt and bone were assayed using high-purity germanium detectors. Analysis of all fish samples showed that the 137Cs distribution was highest in muscle (54 ± 12%), followed by internal organs (7.8 ± 4.6%), spawn (7.4 ± 5.4%), milt (3.2 ± 2.1%) and bone (1.2 ± 0.58%). Among fish species, the highest proportion of 137Cs in muscle was detected in largemouth bass (71 ± 1 3%), followed by snakehead (69 ± 14%), channel catfish (63 ± 17%), common carp (62 ± 14%), barbel steed (58 ± 6.5%), silver carp (57 ± 7.7%), bluegill (53 ± 4.7%), and crucian carp (50 ± 10%). These results suggested that the 137Cs in muscle was likely to be high in piscivorous fishes compared to omnivorous fishes, especially crucian carp. The proportion of 137Cs in muscle of crucian carp was not explained either by body length or fresh weight. However, a positive correlation was found between the proportion of 137Cs in muscle and the condition factor which was an indicator of nutritional status calculated from a length-weight relationship. This correlation implied that more 137Cs accumulated in muscle tissue of a fish species with high nutritional status. This is the first study to show that condition factor is more important than body length and wet weight in explaining the high proportion of 137Cs in muscle tissues, at least for crucian carp.


Assuntos
Radioisótopos de Césio/análise , Monitoramento Ambiental , Peixes/metabolismo , Água Doce , Poluentes Químicos da Água/análise , Animais , Peixes/crescimento & desenvolvimento , Japão , Desenvolvimento Muscular , Músculos/metabolismo
11.
Oecologia ; 194(4): 541-554, 2020 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-32803339

RESUMO

Parasitism is arguably the most commonly occurring consumer strategy. However, only a few food web studies assess how well stable isotopes reflect the trophic position of parasitic consumers and results are variable. Even fewer studies have measured the nutrient transfer by parasitic consumers, hindering an assessment of their role in nutrient transfer through food webs. Here we used a food chain consisting of a diatom as host, a chytrid as its parasitic consumer and a rotifer as the predatory consumer of the chytrid, to assess the trophic position of all three food-chain components using their natural 13C and 15N isotope signatures, and to measure the nitrogen transfer from the host via the chytrid to the rotifer by tracing 15N of a labelled host up the food chain. Additionally, we measured the carbon to nitrogen (C:N) ratios of all food-chain components. Natural isotope abundance results showed no clear 15N enrichment in the chytrid or rotifer relative to the primary producer. However, estimates of nitrogen transfer indicated that about 14% of host nitrogen was transferred per day from host to chytrid during infection epidemics and that some of this nitrogen was also transferred onward to the rotifer. Moreover, C:N ratios decreased with trophic level, suggesting that the chytrid provided a high-quality food source to the rotifer. In conclusion, our results support the "mycoloop". The mycooloop proposes that chytrid infections allow the transfer of nutrients bound in large, inedible phytoplankton to zooplankton through the production of edible transmission spores, thereby rerouting nutrients back into the food web.


Assuntos
Cadeia Alimentar , Parasitos , Animais , Nitrogênio , Isótopos de Nitrogênio , Plâncton , Zooplâncton
12.
Protist ; 171(3): 125728, 2020 07.
Artigo em Inglês | MEDLINE | ID: mdl-32544843

RESUMO

Aphelids (Aphelida) are intracellular parasitoids of algae and represent one of the early diverging or sister lineages of the kingdom Fungi. Although Aphelida is a small group, molecular phylogenetic analyses revealed that many environmental sequences belong to Aphelida, suggesting that aphelids are distributed worldwide; however, the extent of their diversity is unclear. Here, we investigated a novel aphelid culture APH2 that parasitizes the green alga Coccomyxa sp. APH2 produced posteriorly uniflagellate zoospores, a defining character of the genus Aphelidium. The residual body of APH2 was spherical in the mature plasmodium, but became amorphous during zoospore formation and collapsed after zoospore discharge, which has not been described for other Aphelidium species. Zoospores of APH2 possessed a striated rhizoplast that extended anteriorly from the kinetosome to the posterior end of the nucleus, and a microtubular root arising from the side of the kinetosome and lying almost parallel to the rhizoplast, both of which are unique among aphelid taxa. A molecular phylogenetic analysis based on the 18S rDNA sequences placed APH2 as sister lineage to all other known aphelid sequences. Based on these results, we describe this aphelid as a new species, Aphelidium collabens.


Assuntos
Clorófitas/microbiologia , Eucariotos/classificação , Filogenia , Evolução Biológica , Eucariotos/ultraestrutura , Fungos/classificação , Japão , Microscopia Eletrônica de Transmissão , RNA Ribossômico 18S/genética
13.
Ecology ; 101(1): e02900, 2020 01.
Artigo em Inglês | MEDLINE | ID: mdl-31544240

RESUMO

Fungal diseases threaten natural and man-made ecosystems. Chytridiomycota (chytrids) infect a wide host range, including phytoplankton species that form the basis of aquatic food webs and produce roughly half of Earth's oxygen. However, blooms of large or toxic phytoplankton form trophic bottlenecks, as they are inedible to zooplankton. Chytrids infecting inedible phytoplankton provide a trophic link to zooplankton by producing edible zoospores of high nutritional quality. By grazing chytrid zoospores, zooplankton may induce a trophic cascade, as a decreased zoospore density will reduce new infections. Conversely, fewer infections will not produce enough zoospores to sustain long-term zooplankton growth and reproduction. This intricate balance between zoospore density necessary for zooplankton energetic demands (growth/survival), and the loss in new infections (and thus new zoospores) because of grazing was tested empirically. To this end, we exposed a cyanobacterial host (Planktothrix rubescens) infected by a chytrid (Rizophydium megarrhizum) to a grazer density gradient (the rotifer Keratella cf. cochlearis). Rotifers survived and reproduced on a zoospore diet, but the Keratella population growth was limited by the amount of zoospores provided by chytrid infections, resulting in a situation where zooplankton survived but were restricted in their ability to control disease in the cyanobacterial host. We subsequently developed and parameterized a dynamical food-chain model using an allometric relationship for clearance rate to assess theoretically the potential of different-sized zooplankton groups to restrict disease in phytoplankton hosts. Our model suggests that smaller-sized zooplankton may have a high potential to reduce chytrid infections on inedible phytoplankton. Together, our results point out the complexity of three-way interactions between hosts, parasites, and grazers and highlight that trophic cascades are not always sustainable and may depend on the grazer's energetic demand.


Assuntos
Epidemias , Zooplâncton , Animais , Cianobactérias , Ecossistema , Cadeia Alimentar , Fitoplâncton , Planktothrix
14.
mBio ; 10(2)2019 03 05.
Artigo em Inglês | MEDLINE | ID: mdl-30837337

RESUMO

Terrestrial fungi play critical roles in nutrient cycling and food webs and can shape macroorganism communities as parasites and mutualists. Although estimates for the number of fungal species on the planet range from 1.5 to over 5 million, likely fewer than 10% of fungi have been identified so far. To date, a relatively small percentage of described species are associated with marine environments, with ∼1,100 species retrieved exclusively from the marine environment. Nevertheless, fungi have been found in nearly every marine habitat explored, from the surface of the ocean to kilometers below ocean sediments. Fungi are hypothesized to contribute to phytoplankton population cycles and the biological carbon pump and are active in the chemistry of marine sediments. Many fungi have been identified as commensals or pathogens of marine animals (e.g., corals and sponges), plants, and algae. Despite their varied roles, remarkably little is known about the diversity of this major branch of eukaryotic life in marine ecosystems or their ecological functions. This perspective emerges from a Marine Fungi Workshop held in May 2018 at the Marine Biological Laboratory in Woods Hole, MA. We present the state of knowledge as well as the multitude of open questions regarding the diversity and function of fungi in the marine biosphere and geochemical cycles.


Assuntos
Organismos Aquáticos/classificação , Organismos Aquáticos/isolamento & purificação , Biodiversidade , Fungos/classificação , Fungos/isolamento & purificação , Sedimentos Geológicos/microbiologia , Água do Mar/microbiologia
15.
Nat Rev Microbiol ; 17(6): 339-354, 2019 06.
Artigo em Inglês | MEDLINE | ID: mdl-30872817

RESUMO

Fungi are phylogenetically and functionally diverse ubiquitous components of almost all ecosystems on Earth, including aquatic environments stretching from high montane lakes down to the deep ocean. Aquatic ecosystems, however, remain frequently overlooked as fungal habitats, although fungi potentially hold important roles for organic matter cycling and food web dynamics. Recent methodological improvements have facilitated a greater appreciation of the importance of fungi in many aquatic systems, yet a conceptual framework is still missing. In this Review, we conceptualize the spatiotemporal dimensions, diversity, functions and organismic interactions of fungi in structuring aquatic food webs. We focus on currently unexplored fungal diversity, highlighting poorly understood ecosystems, including emerging artificial aquatic habitats.


Assuntos
Ecossistema , Fungos/isolamento & purificação , Microbiologia da Água , Antibiose , Biomassa , Cadeia Alimentar , Fungos/classificação , Fungos/genética
16.
ISME J ; 13(8): 1899-1910, 2019 08.
Artigo em Inglês | MEDLINE | ID: mdl-30809012

RESUMO

Extant eukaryote ecology is primarily sustained by oxygenic photosynthesis, in which chlorophylls play essential roles. The exceptional photosensitivity of chlorophylls allows them to harvest solar energy for photosynthesis, but on the other hand, they also generate cytotoxic reactive oxygen species. A risk of such phototoxicity of the chlorophyll must become particularly prominent upon dynamic cellular interactions that potentially disrupt the mechanisms that are designed to quench photoexcited chlorophylls in the phototrophic cells. Extensive examination of a wide variety of phagotrophic, parasitic, and phototrophic microeukaryotes demonstrates that a catabolic process that converts chlorophylls into nonphotosensitive 132,173-cyclopheophorbide enols (CPEs) is phylogenetically ubiquitous among extant eukaryotes. The accumulation of CPEs is identified in phagotrophic algivores belonging to virtually all major eukaryotic assemblages with the exception of Archaeplastida, in which no algivorous species have been reported. In addition, accumulation of CPEs is revealed to be common among phototrophic microeukaryotes (i.e., microalgae) along with dismantling of their secondary chloroplasts. Thus, we infer that CPE-accumulating chlorophyll catabolism (CACC) primarily evolved among algivorous microeukaryotes to detoxify chlorophylls in an early stage of their evolution. Subsequently, it also underpinned photosynthetic endosymbiosis by securing close interactions with photosynthetic machinery containing abundant chlorophylls, which led to the acquisition of secondary chloroplasts. Our results strongly suggest that CACC, which allowed the consumption of oxygenic primary producers, ultimately permitted the successful radiation of the eukaryotes throughout and after the late Proterozoic global oxygenation.


Assuntos
Clorofila/metabolismo , Eucariotos/metabolismo , Oxigênio/metabolismo , Cloroplastos/metabolismo , Ecossistema , Eucariotos/classificação , Eucariotos/genética , Microalgas/classificação , Microalgas/genética , Microalgas/metabolismo , Fotossíntese , Filogenia , Simbiose
17.
Mol Ecol Resour ; 19(1): 118-127, 2019 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-30240145

RESUMO

Sequence comparison and analysis of the various ribosomal genetic markers are the dominant molecular methods for identification and description of fungi. However, new environmental fungal lineages known only from DNA data reveal significant gaps in our sampling of the fungal kingdom in terms of both taxonomy and marker coverage in the reference sequence databases. To facilitate the integration of reference data from all of the ribosomal markers, we present three sets of general primers that allow for amplification of the complete ribosomal operon from the ribosomal tandem repeats. The primers cover all ribosomal markers: ETS, SSU, ITS1, 5.8S, ITS2, LSU and IGS. We coupled these primers successfully with third-generation sequencing (PacBio and Nanopore sequencing) to showcase our approach on authentic fungal herbarium specimens (Basidiomycota), aquatic chytrids (Chytridiomycota) and a poorly understood lineage of early diverging fungi (Nephridiophagidae). In particular, we were able to generate high-quality reference data with Nanopore sequencing in a high-throughput manner, showing that the generation of reference data can be achieved on a regular desktop computer without the involvement of any large-scale sequencing facility. The quality of the Nanopore generated sequences was 99.85%, which is comparable with the 99.78% accuracy described for Sanger sequencing. With this work, we hope to stimulate the generation of a new comprehensive standard of ribosomal reference data with the ultimate aim to close the huge gaps in our reference datasets.


Assuntos
Código de Barras de DNA Taxonômico/métodos , DNA Ribossômico/genética , Fungos/classificação , Fungos/genética , Genes de RNAr , Sequências de Repetição em Tandem , Análise por Conglomerados , Primers do DNA/genética , DNA Fúngico/química , DNA Fúngico/genética , DNA Ribossômico/química , DNA Espaçador Ribossômico/química , DNA Espaçador Ribossômico/genética , Sequenciamento de Nucleotídeos em Larga Escala , Filogenia , RNA Ribossômico/genética , RNA Ribossômico 18S/genética , RNA Ribossômico 5,8S/genética , Análise de Sequência de DNA
18.
Water Res ; 145: 346-353, 2018 11 15.
Artigo em Inglês | MEDLINE | ID: mdl-30170302

RESUMO

Algae-derived dissolved organic matter (AOM) is an important nutrient source for heterotrophic bacteria, while AOM such as humic substances pose significant challenges during water treatment processing. We hypothesized that the parasitic infection of algae could change the composition and concentration of AOM. This study investigated the quality and quantity of DOM and bacterial abundance in diatom (Synedra) cultures, with and without parasitic fungi (chytrids). The quality of DOM was analyzed using three-dimensional excitation-emission matrix combined with parallel factor analysis (EEM-PARAFAC) and was compared to changes in algal and bacterial cell numbers. Bacterial abundance was higher and dissolved organic carbon concentrations were lower in the diatom cultures infected with parasitic fungi. Among the DOM compounds, the concentrations of tryptophan-like material derived from algae were significantly lower and the concentrations of humic substance-like material were higher in the infected treatment. The parasitic fungi may have consumed tryptophan-like material and stimulated the release of humic substances. These results provide the first evidence that fungal infection may modulate algal-bacterial interactions, which are associated with changes in the nature of AOM.


Assuntos
Substâncias Húmicas , Purificação da Água , Análise Fatorial , Plantas , Espectrometria de Fluorescência
19.
J Eukaryot Microbiol ; 65(6): 870-881, 2018 11.
Artigo em Inglês | MEDLINE | ID: mdl-29752884

RESUMO

Chytrids are zoosporic fungi that play an important, but yet understudied, ecological role in aquatic ecosystems. Many chytrid species have been morphologically described as parasites on phytoplankton. However, the majority of them have rarely been isolated and lack DNA sequence data. In this study we isolated and cultivated three parasitic chytrids, infecting a common volvocacean host species, Yamagishiella unicocca. To identify the chytrids, we characterized morphology and life cycle, and analyzed phylogenetic relationships based on 18S and 28S rDNA genes. Host range and specificity of the chytrids was determined by cross-infection assays with host strains, characterized by rbcL and ITS markers. We were able to confirm the identity of two chytrid strains as Endocoenobium eudorinae Ingold and Dangeardia mamillata Schröder and described the third chytrid strain as Algomyces stechlinensis gen. et sp. nov. The three chytrids were assigned to novel and phylogenetically distant clades within the phylum Chytridiomycota, each exhibiting different host specificities. By integrating morphological and molecular data of both the parasitic chytrids and their respective host species, we unveiled cryptic host-parasite associations. This study highlights that a high prevalence of (pseudo)cryptic diversity requires molecular characterization of both phytoplankton host and parasitic chytrid to accurately identify and compare host range and specificity, and to study phytoplankton-chytrid interactions in general.


Assuntos
Clorofíceas/microbiologia , Quitridiomicetos/classificação , Quitridiomicetos/isolamento & purificação , Quitridiomicetos/patogenicidade , Especificidade de Hospedeiro , Filogenia , Quitridiomicetos/genética , Infecção Hospitalar , DNA Fúngico/genética , DNA Ribossômico/genética , Alemanha , Interações Hospedeiro-Parasita , Lagos/microbiologia , Estágios do Ciclo de Vida , Fitoplâncton/microbiologia , RNA Ribossômico 18S/genética , RNA Ribossômico 28S/genética
20.
Protist ; 168(4): 392-407, 2017 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-28704705

RESUMO

Chytrids are a diverse group of ubiquitous true zoosporic fungi. The recent molecular discovery of a large diversity of undescribed chytrids has raised awareness on their important, but so far understudied ecological role in aquatic ecosystems. In the pelagic zone, of both freshwater and marine ecosystems, many chytrid species have been morphologically described as parasites on almost all major groups of phytoplankton. However, the majority of these parasitic chytrids has rarely been isolated and lack DNA sequence data, resulting in a large proportion of "dark taxa" in databases. Here, we report on the isolation and in-depth morphological, molecular and host range characterization of a chytrid infecting the common freshwater desmid Staurastrum sp. We provide first insights on the metabolic activity of the different chytrid development stages by using the vital dye FUN®-1 (2-chloro-4-[2,3-dihydro-3-methyl-[benzo-1,3-thiazol-2-yl]-methylidene]-1-phenylquinolinium iodide). Cross infection experiments suggest that this chytrid is an obligate parasite and specific for the genus Staurastrum sp. Phylogenetic analysis, based on ITS1-5.8S-ITS2 and 28S rDNA sequences, placed it in the order Rhizophydiales. Based on the unique zoospore ultrastructure, combined with thallus morphology, and molecular phylogenetic placement, we describe this parasitic chytrid as a new genus and species Staurastromyces oculus, within a new family Staurastromycetaceae.


Assuntos
Quitridiomicetos/classificação , Quitridiomicetos/fisiologia , Desmidiales/microbiologia , Quitridiomicetos/genética , DNA Espaçador Ribossômico/genética , Alemanha , Especificidade de Hospedeiro , Lagos/microbiologia , Filogenia , RNA Fúngico/genética , RNA Ribossômico 28S/genética , Análise de Sequência de RNA , Especificidade da Espécie
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